GNU Parallel with environment

- NAME
- SYNOPSIS
- DESCRIPTION
  - Environment space
- OPTIONS
- SUPPORTED SHELLS
  - Ash
  - Bash
    - BUGS
  - csh
  - Dash
  - fish
  - ksh
  - pdksh
  - sh
  - tcsh
  - Zsh
- EXIT STATUS
- AUTHOR
- LICENSE
  - Documentation license I
  - Documentation license II
- DEPENDENCIES
- SEE ALSO

# NAME

env_parallel - export environment to GNU parallel

# SYNOPSIS

env_parallel [options for GNU Parallel]

# DESCRIPTION

env_parallel is a shell function that exports the current environment to GNU parallel.

If the shell function is not loaded, a dummy script will be run instead that explains how to install the function.

env_parallel is beta quality and not production ready, but please use it for everyday use and report bugs.

env_parallel is 0.1 sec slower at startup than pure GNU parallel, and takes up to 30% longer to start a job (typically 15 ms).

Due to the problem with environment space (see below) the recommended usage is:

      # Record the "clean" environment (this only needs to be run once)
      env_parallel --record-env

      # Optionally edit ~/.parallel/ignored_vars (only needed once)

      # Define whatever you want to use
      alias myalias=echo
      myvar=it
      myfunc() { myalias $1 $myvar works.; }

      # Use --env _ to only transfer the names not in the "empty" environment
      env_parallel --env _ -S localhost myfunc ::: Yay,

In csh:

      # Record the "clean" environment (this only needs to be run once)
      env_parallel --record-env

      # Optionally edit ~/.parallel/ignored_vars (only needed once)

      # Define whatever you want to use
      alias myalias 'echo \!* $myvar works.'
      set myvar=it

      # Use --env _ to only transfer the names not in the "empty" environment
      env_parallel --env _ -S localhost myalias ::: Yay,

## Environment space

By default env_parallel will export all environment variables, arrays, aliases, functions and shell options (see details for the individual shells below).

But this only works if the size of the current environment is smaller than the maximal length of a command and smaller than half of the max if running remotely. E.g. The max size of Bash's command is 128 KB, so env_parallel will fail if 'set | wc -c' is bigger than 128 KB. Technically the limit is in execve(1) which IPC::open3 uses.

Bash completion functions are well-known for taking up well over 128 KB of environment space and the primary reason for causing env_parallel to fail.

Instead you can use --env to specify which variables, arrays, aliases and functions to export as this will only export those with the given name. Or follow the recommended usage in shown in DESCRIPTION.

# OPTIONS

Same as GNU parallel.

# SUPPORTED SHELLS

## Ash

--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.profile:

      . `which env_parallel.ash`

E.g. by doing:

      echo '. `which env_parallel.ash`' >> $HOME/.profile

aliases

        alias myecho='echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

        alias multiline='echo multiline
          echo aliases'
        env_parallel multiline ::: work
        env_parallel -S server multiline ::: work
        env_parallel --env multiline multiline ::: work
        env_parallel --env multiline -S server multiline ::: work

functions

        ash cannot list defined functions - thus is not supported.

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

  Arrays are not supported by Ash.

## Bash

--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.bashrc:

      . `which env_parallel.bash`

E.g. by doing:

      echo '. `which env_parallel.bash`' >> $HOME/.bashrc

aliases

        alias myecho='echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

        alias multiline='echo multiline
          echo aliases'
        env_parallel 'multiline {};
          echo but only when followed by a newline' ::: work
        env_parallel -S server 'multiline {};
          echo but only when followed by a newline' ::: work
        env_parallel --env multiline 'multiline {};
          echo but only when followed by a newline' ::: work
        env_parallel --env multiline -S server 'multiline {};
          echo but only when followed by a newline' ::: work

functions

        myfunc() { echo functions $*; }
        env_parallel myfunc ::: work
        env_parallel -S server myfunc ::: work
        env_parallel --env myfunc myfunc ::: work
        env_parallel --env myfunc -S server myfunc ::: work

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        myarray=(arrays work, too)
        env_parallel -k echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k -S server echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k --env myarray echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k --env myarray -S server echo '${myarray[{}]}' ::: 0 1 2

### BUGS

Due to a bug in Bash aliases containing newlines must be followed by a newline in the command.

## csh

--env is supported to export only the variable, alias, or array with the given name. Multiple --envs can be given.

env_parallel for csh breaks $PARALLEL, so do not use $PARALLEL.

Installation

Put this in $HOME/.cshrc:

      source `which env_parallel.csh`

E.g. by doing:

      echo 'source `which env_parallel.csh`' >> $HOME/.cshrc

aliases

        alias myecho 'echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

functions

  Not supported by csh.

variables

        set myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays with no special chars

        set myarray=(arrays work, too)
        env_parallel -k echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k -S server echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray -S server echo \$'{myarray[{}]}' ::: 1 2 3

## Dash

--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.profile:

      . `which env_parallel.dash`

E.g. by doing:

      echo '. `which env_parallel.dash`' >> $HOME/.profile

aliases

        alias myecho='echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

        alias multiline='echo multiline
          echo aliases'
        env_parallel multiline ::: work
        env_parallel -S server multiline ::: work
        env_parallel --env multiline multiline ::: work
        env_parallel --env multiline -S server multiline ::: work

functions

        dash cannot list defined functions - thus is not supported.

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        dash does not support arrays.

## fish

--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.config/fish/config.fish:

      source (which env_parallel.fish)

E.g. by doing:

      echo 'source (which env_parallel.fish)' >> $HOME/.config/fish/config.fish

aliases

        alias myecho 'echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

functions

        function myfunc
          echo functions $argv
        end
        env_parallel myfunc ::: work
        env_parallel -S server myfunc ::: work
        env_parallel --env myfunc myfunc ::: work
        env_parallel --env myfunc -S server myfunc ::: work

variables

        set myvar variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        set myarray arrays work, too
        env_parallel -k echo '$myarray[{}]' ::: 1 2 3
        env_parallel -k -S server echo '$myarray[{}]' ::: 1 2 3
        env_parallel -k --env myarray echo '$myarray[{}]' ::: 1 2 3
        env_parallel -k --env myarray -S server echo '$myarray[{}]' ::: 1 2 3

## ksh

--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.kshrc:

      source `which env_parallel.ksh`

E.g. by doing:

      echo 'source `which env_parallel.ksh`' >> $HOME/.kshrc

aliases

        alias myecho='echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

        alias multiline='echo multiline
          echo aliases'
        env_parallel multiline ::: work
        env_parallel -S server multiline ::: work
        env_parallel --env multiline multiline ::: work
        env_parallel --env multiline -S server multiline ::: work

functions

        myfunc() { echo functions $*; }
        env_parallel myfunc ::: work
        env_parallel -S server myfunc ::: work
        env_parallel --env myfunc myfunc ::: work
        env_parallel --env myfunc -S server myfunc ::: work

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        myarray=(arrays work, too)
        env_parallel -k echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k -S server echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k --env myarray echo '${myarray[{}]}' ::: 0 1 2
        env_parallel -k --env myarray -S server echo '${myarray[{}]}' ::: 0 1 2

## pdksh

--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.profile:

      source `which env_parallel.pdksh`

E.g. by doing:

      echo 'source `which env_parallel.pdksh`' >> $HOME/.profile

aliases

        alias myecho="echo aliases";
        env_parallel myecho ::: work;
        env_parallel -S server myecho ::: work;
        env_parallel --env myecho myecho ::: work;
        env_parallel --env myecho -S server myecho ::: work

functions

        myfunc() { echo functions $*; };
        env_parallel myfunc ::: work;
        env_parallel -S server myfunc ::: work;
        env_parallel --env myfunc myfunc ::: work;
        env_parallel --env myfunc -S server myfunc ::: work

variables

        myvar=variables;
        env_parallel echo "\$myvar" ::: work;
        env_parallel -S server echo "\$myvar" ::: work;
        env_parallel --env myvar echo "\$myvar" ::: work;
        env_parallel --env myvar -S server echo "\$myvar" ::: work

arrays

        myarray=(arrays work, too);
        env_parallel -k echo "\${myarray[{}]}" ::: 0 1 2;
        env_parallel -k -S server echo "\${myarray[{}]}" ::: 0 1 2;
        env_parallel -k --env myarray echo "\${myarray[{}]}" ::: 0 1 2;
        env_parallel -k --env myarray -S server echo "\${myarray[{}]}" ::: 0 1 2

## sh

--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.profile:

      . `which env_parallel.sh`

E.g. by doing:

      echo '. `which env_parallel.sh`' >> $HOME/.profile

aliases

        sh does not support aliases.

functions

        myfunc() { echo functions $*; }
        env_parallel myfunc ::: work
        env_parallel -S server myfunc ::: work
        env_parallel --env myfunc myfunc ::: work
        env_parallel --env myfunc -S server myfunc ::: work

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        sh does not support arrays.

## tcsh

--env is supported to export only the variable, alias, or array with the given name. Multiple --envs can be given.

env_parallel for tcsh breaks $PARALLEL, so do not use $PARALLEL.

Installation

Put this in $HOME/.tcshrc:

      source `which env_parallel.tcsh`

E.g. by doing:

      echo 'source `which env_parallel.tcsh`' >> $HOME/.tcshrc

aliases

        alias myecho 'echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

functions

  Not supported by tcsh.

variables

        set myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays with no special chars

        set myarray=(arrays work, too)
        env_parallel -k echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k -S server echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray echo \$'{myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray -S server echo \$'{myarray[{}]}' ::: 1 2 3

## Zsh

--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.

Installation

Put this in $HOME/.zshrc:

      . `which env_parallel.zsh`

E.g. by doing:

      echo '. `which env_parallel.zsh`' >> $HOME/.zshenv

aliases

        alias myecho='echo aliases'
        env_parallel myecho ::: work
        env_parallel -S server myecho ::: work
        env_parallel --env myecho myecho ::: work
        env_parallel --env myecho -S server myecho ::: work

        alias multiline='echo multiline
          echo aliases'
        env_parallel multiline ::: work
        env_parallel -S server multiline ::: work
        env_parallel --env multiline multiline ::: work
        env_parallel --env multiline -S server multiline ::: work

functions

        myfunc() { echo functions $*; }
        env_parallel myfunc ::: work
        env_parallel -S server myfunc ::: work
        env_parallel --env myfunc myfunc ::: work
        env_parallel --env myfunc -S server myfunc ::: work

variables

        myvar=variables
        env_parallel echo '$myvar' ::: work
        env_parallel -S server echo '$myvar' ::: work
        env_parallel --env myvar echo '$myvar' ::: work
        env_parallel --env myvar -S server echo '$myvar' ::: work

arrays

        myarray=(arrays work, too)
        env_parallel -k echo '${myarray[{}]}' ::: 1 2 3
        env_parallel -k -S server echo '${myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray echo '${myarray[{}]}' ::: 1 2 3
        env_parallel -k --env myarray -S server echo '${myarray[{}]}' ::: 1 2 3

# EXIT STATUS

Same as GNU parallel.

# AUTHOR

When using GNU env_parallel for a publication please cite:

O. Tange (2011): GNU Parallel - The Command-Line Power Tool, ;login: The USENIX Magazine, February 2011:42-47.

This helps funding further development; and it won't cost you a cent. If you pay 10000 EUR you should feel free to use GNU Parallel without citing.

Copyright (C) 2007-10-18 Ole Tange, http://ole.tange.dk

Copyright (C) 2008,2009,2010 Ole Tange, http://ole.tange.dk

Copyright (C) 2010,2011,2012,2013,2014,2015,2016,2017 Ole Tange, http://ole.tange.dk and Free Software Foundation, Inc.

# LICENSE

Copyright (C) 2016,2017 Free Software Foundation, Inc.

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or at your option any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.

## Documentation license I

Permission is granted to copy, distribute and/or modify this documentation under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, with no Front-Cover Texts, and with no Back-Cover Texts. A copy of the license is included in the file fdl.txt.

## Documentation license II

You are free:

to Share

  to copy, distribute and transmit the work

to Remix

  to adapt the work

Under the following conditions:

Attribution

  You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work).

Share Alike

  If you alter, transform, or build upon this work, you may distribute the resulting work only under the same, similar or a compatible license.

With the understanding that:

Waiver

  Any of the above conditions can be waived if you get permission from the copyright holder.

Public Domain

  Where the work or any of its elements is in the public domain under applicable law, that status is in no way affected by the license.

Other Rights

  In no way are any of the following rights affected by the license:

  - Your fair dealing or fair use rights, or other applicable copyright exceptions and limitations;

  - The author's moral rights;

  - Rights other persons may have either in the work itself or in how the work is used, such as publicity or privacy rights.

Notice

  For any reuse or distribution, you must make clear to others the license terms of this work.

A copy of the full license is included in the file as cc-by-sa.txt.

# DEPENDENCIES

env_parallel uses GNU parallel.

# SEE ALSO

parallel(1),

ash(1), bash(1), csh(1), dash(1), fish(1), ksh(1), pdksh(1) tcsh(1), zsh(1).