"""Mypy type checker command line tool."""

import argparse
from gettext import gettext
import os
import subprocess
import sys
import time

from typing import Any, Dict, IO, List, Optional, Sequence, Tuple, TextIO, Union
from typing_extensions import Final, NoReturn

from mypy import build
from mypy import defaults
from mypy import state
from mypy import util
from mypy.modulefinder import BuildSource, FindModuleCache, mypy_path, SearchPaths
from mypy.find_sources import create_source_list, InvalidSourceList
from mypy.fscache import FileSystemCache
from mypy.errors import CompileError
from mypy.options import Options, BuildType
from mypy.config_parser import parse_version, parse_config_file
from mypy.split_namespace import SplitNamespace

from mypy.version import __version__

orig_stat = os.stat  # type: Final
MEM_PROFILE = False  # type: Final  # If True, dump memory profile


def stat_proxy(path: str) -> os.stat_result:
    try:
        st = orig_stat(path)
    except os.error as err:
        print("stat(%r) -> %s" % (path, err))
        raise
    else:
        print("stat(%r) -> (st_mode=%o, st_mtime=%d, st_size=%d)" %
              (path, st.st_mode, st.st_mtime, st.st_size))
        return st


def main(script_path: Optional[str],
         stdout: TextIO,
         stderr: TextIO,
         args: Optional[List[str]] = None,
         ) -> None:
    """Main entry point to the type checker.

    Args:
        script_path: Path to the 'mypy' script (used for finding data files).
        args: Custom command-line arguments.  If not given, sys.argv[1:] will
        be used.
    """
    util.check_python_version('mypy')
    t0 = time.time()
    # To log stat() calls: os.stat = stat_proxy
    sys.setrecursionlimit(2 ** 14)
    if args is None:
        args = sys.argv[1:]

    fscache = FileSystemCache()
    sources, options = process_options(args, stdout=stdout, stderr=stderr,
                                       fscache=fscache)

    messages = []
    formatter = util.FancyFormatter(stdout, stderr, options.show_error_codes)

    def flush_errors(new_messages: List[str], serious: bool) -> None:
        if options.pretty:
            new_messages = formatter.fit_in_terminal(new_messages)
        messages.extend(new_messages)
        f = stderr if serious else stdout
        try:
            for msg in new_messages:
                if options.color_output:
                    msg = formatter.colorize(msg)
                f.write(msg + '\n')
            f.flush()
        except BrokenPipeError:
            sys.exit(2)

    serious = False
    blockers = False
    res = None
    try:
        # Keep a dummy reference (res) for memory profiling below, as otherwise
        # the result could be freed.
        res = build.build(sources, options, None, flush_errors, fscache, stdout, stderr)
    except CompileError as e:
        blockers = True
        if not e.use_stdout:
            serious = True
    if options.warn_unused_configs and options.unused_configs and not options.incremental:
        print("Warning: unused section(s) in %s: %s" %
              (options.config_file,
               ", ".join("[mypy-%s]" % glob for glob in options.per_module_options.keys()
                         if glob in options.unused_configs)),
              file=stderr)
    if options.junit_xml:
        t1 = time.time()
        py_version = '{}_{}'.format(options.python_version[0], options.python_version[1])
        util.write_junit_xml(t1 - t0, serious, messages, options.junit_xml,
                             py_version, options.platform)

    if MEM_PROFILE:
        from mypy.memprofile import print_memory_profile
        print_memory_profile()

    code = 0
    if messages:
        code = 2 if blockers else 1
    if options.error_summary:
        if messages:
            n_errors, n_files = util.count_stats(messages)
            if n_errors:
                stdout.write(formatter.format_error(n_errors, n_files, len(sources),
                                                    options.color_output) + '\n')
        else:
            stdout.write(formatter.format_success(len(sources),
                                                  options.color_output) + '\n')
        stdout.flush()
    if options.fast_exit:
        # Exit without freeing objects -- it's faster.
        #
        # NOTE: We don't flush all open files on exit (or run other destructors)!
        util.hard_exit(code)
    elif code:
        sys.exit(code)

    # HACK: keep res alive so that mypyc won't free it before the hard_exit
    list([res])


# Make the help output a little less jarring.
class AugmentedHelpFormatter(argparse.RawDescriptionHelpFormatter):
    def __init__(self, prog: str) -> None:
        super().__init__(prog=prog, max_help_position=28)

    # FIXME: typeshed incorrectly has the type of indent as int when
    # it should be str. Make it Any to avoid rusing mypyc.
    def _fill_text(self, text: str, width: int, indent: Any) -> str:
        if '\n' in text:
            # Assume we want to manually format the text
            return super()._fill_text(text, width, indent)
        else:
            # Assume we want argparse to manage wrapping, indentating, and
            # formatting the text for us.
            return argparse.HelpFormatter._fill_text(self, text, width, indent)


# Define pairs of flag prefixes with inverse meaning.
flag_prefix_pairs = [
    ('allow', 'disallow'),
    ('show', 'hide'),
]  # type: Final
flag_prefix_map = {}  # type: Final[Dict[str, str]]
for a, b in flag_prefix_pairs:
    flag_prefix_map[a] = b
    flag_prefix_map[b] = a


def invert_flag_name(flag: str) -> str:
    split = flag[2:].split('-', 1)
    if len(split) == 2:
        prefix, rest = split
        if prefix in flag_prefix_map:
            return '--{}-{}'.format(flag_prefix_map[prefix], rest)
        elif prefix == 'no':
            return '--{}'.format(rest)

    return '--no-{}'.format(flag[2:])


class PythonExecutableInferenceError(Exception):
    """Represents a failure to infer the version or executable while searching."""


def python_executable_prefix(v: str) -> List[str]:
    if sys.platform == 'win32':
        # on Windows, all Python executables are named `python`. To handle this, there
        # is the `py` launcher, which can be passed a version e.g. `py -3.5`, and it will
        # execute an installed Python 3.5 interpreter. See also:
        # https://docs.python.org/3/using/windows.html#python-launcher-for-windows
        return ['py', '-{}'.format(v)]
    else:
        return ['python{}'.format(v)]


def _python_executable_from_version(python_version: Tuple[int, int]) -> str:
    if sys.version_info[:2] == python_version:
        return sys.executable
    str_ver = '.'.join(map(str, python_version))
    try:
        sys_exe = subprocess.check_output(python_executable_prefix(str_ver) +
                                          ['-c', 'import sys; print(sys.executable)'],
                                          stderr=subprocess.STDOUT).decode().strip()
        return sys_exe
    except (subprocess.CalledProcessError, FileNotFoundError):
        raise PythonExecutableInferenceError(
            'failed to find a Python executable matching version {},'
            ' perhaps try --python-executable, or --no-site-packages?'.format(python_version))


def infer_python_executable(options: Options,
                            special_opts: argparse.Namespace) -> None:
    """Infer the Python executable from the given version.

    This function mutates options based on special_opts to infer the correct Python executable
    to use.
    """
    # TODO: (ethanhs) Look at folding these checks and the site packages subprocess calls into
    # one subprocess call for speed.

    # Use the command line specified executable, or fall back to one set in the
    # config file. If an executable is not specified, infer it from the version
    # (unless no_executable is set)
    python_executable = special_opts.python_executable or options.python_executable

    if python_executable is None:
        if not special_opts.no_executable and not options.no_site_packages:
            python_executable = _python_executable_from_version(options.python_version)
    options.python_executable = python_executable


HEADER = """%(prog)s [-h] [-v] [-V] [more options; see below]
            [-m MODULE] [-p PACKAGE] [-c PROGRAM_TEXT] [files ...]"""  # type: Final


DESCRIPTION = """
Mypy is a program that will type check your Python code.

Pass in any files or folders you want to type check. Mypy will
recursively traverse any provided folders to find .py files:

    $ mypy my_program.py my_src_folder

For more information on getting started, see:

- http://mypy.readthedocs.io/en/latest/getting_started.html

For more details on both running mypy and using the flags below, see:

- http://mypy.readthedocs.io/en/latest/running_mypy.html
- http://mypy.readthedocs.io/en/latest/command_line.html

You can also use a config file to configure mypy instead of using
command line flags. For more details, see:

- http://mypy.readthedocs.io/en/latest/config_file.html
"""  # type: Final

FOOTER = """Environment variables:
  Define MYPYPATH for additional module search path entries.
  Define MYPY_CACHE_DIR to override configuration cache_dir path."""  # type: Final


class CapturableArgumentParser(argparse.ArgumentParser):

    """Override ArgumentParser methods that use sys.stdout/sys.stderr directly.

    This is needed because hijacking sys.std* is not thread-safe,
    yet output must be captured to properly support mypy.api.run.
    """

    def __init__(self, *args: Any, **kwargs: Any):
        self.stdout = kwargs.pop('stdout', sys.stdout)
        self.stderr = kwargs.pop('stderr', sys.stderr)
        super().__init__(*args, **kwargs)

    # =====================
    # Help-printing methods
    # =====================
    def print_usage(self, file: Optional[IO[str]] = None) -> None:
        if file is None:
            file = self.stdout
        self._print_message(self.format_usage(), file)

    def print_help(self, file: Optional[IO[str]] = None) -> None:
        if file is None:
            file = self.stdout
        self._print_message(self.format_help(), file)

    def _print_message(self, message: str, file: Optional[IO[str]] = None) -> None:
        if message:
            if file is None:
                file = self.stderr
            file.write(message)

    # ===============
    # Exiting methods
    # ===============
    def exit(self, status: int = 0, message: Optional[str] = None) -> NoReturn:
        if message:
            self._print_message(message, self.stderr)
        sys.exit(status)

    def error(self, message: str) -> NoReturn:
        """error(message: string)

        Prints a usage message incorporating the message to stderr and
        exits.

        If you override this in a subclass, it should not return -- it
        should either exit or raise an exception.
        """
        self.print_usage(self.stderr)
        args = {'prog': self.prog, 'message': message}
        self.exit(2, gettext('%(prog)s: error: %(message)s\n') % args)


class CapturableVersionAction(argparse.Action):

    """Supplement CapturableArgumentParser to handle --version.

    This is nearly identical to argparse._VersionAction except,
    like CapturableArgumentParser, it allows output to be captured.

    Another notable difference is that version is mandatory.
    This allows removing a line in __call__ that falls back to parser.version
    (which does not appear to exist).
    """

    def __init__(self,
                 option_strings: Sequence[str],
                 version: str,
                 dest: str = argparse.SUPPRESS,
                 default: str = argparse.SUPPRESS,
                 help: str = "show program's version number and exit",
                 stdout: Optional[IO[str]] = None):
        super().__init__(
            option_strings=option_strings,
            dest=dest,
            default=default,
            nargs=0,
            help=help)
        self.version = version
        self.stdout = stdout or sys.stdout

    def __call__(self,
                 parser: argparse.ArgumentParser,
                 namespace: argparse.Namespace,
                 values: Union[str, Sequence[Any], None],
                 option_string: Optional[str] = None) -> NoReturn:
        formatter = parser._get_formatter()
        formatter.add_text(self.version)
        parser._print_message(formatter.format_help(), self.stdout)
        parser.exit()


def process_options(args: List[str],
                    stdout: Optional[TextIO] = None,
                    stderr: Optional[TextIO] = None,
                    require_targets: bool = True,
                    server_options: bool = False,
                    fscache: Optional[FileSystemCache] = None,
                    program: str = 'mypy',
                    header: str = HEADER,
                    ) -> Tuple[List[BuildSource], Options]:
    """Parse command line arguments.

    If a FileSystemCache is passed in, and package_root options are given,
    call fscache.set_package_root() to set the cache's package root.
    """
    stdout = stdout or sys.stdout
    stderr = stderr or sys.stderr

    parser = CapturableArgumentParser(prog=program,
                                      usage=header,
                                      description=DESCRIPTION,
                                      epilog=FOOTER,
                                      fromfile_prefix_chars='@',
                                      formatter_class=AugmentedHelpFormatter,
                                      add_help=False,
                                      stdout=stdout,
                                      stderr=stderr)

    strict_flag_names = []  # type: List[str]
    strict_flag_assignments = []  # type: List[Tuple[str, bool]]

    def add_invertible_flag(flag: str,
                            *,
                            inverse: Optional[str] = None,
                            default: bool,
                            dest: Optional[str] = None,
                            help: str,
                            strict_flag: bool = False,
                            group: Optional[argparse._ActionsContainer] = None
                            ) -> None:
        if inverse is None:
            inverse = invert_flag_name(flag)
        if group is None:
            group = parser

        if help is not argparse.SUPPRESS:
            help += " (inverse: {})".format(inverse)

        arg = group.add_argument(flag,
                                 action='store_false' if default else 'store_true',
                                 dest=dest,
                                 help=help)
        dest = arg.dest
        arg = group.add_argument(inverse,
                                 action='store_true' if default else 'store_false',
                                 dest=dest,
                                 help=argparse.SUPPRESS)
        if strict_flag:
            assert dest is not None
            strict_flag_names.append(flag)
            strict_flag_assignments.append((dest, not default))

    # Unless otherwise specified, arguments will be parsed directly onto an
    # Options object.  Options that require further processing should have
    # their `dest` prefixed with `special-opts:`, which will cause them to be
    # parsed into the separate special_opts namespace object.

    # Note: we have a style guide for formatting the mypy --help text. See
    # https://github.com/python/mypy/wiki/Documentation-Conventions

    general_group = parser.add_argument_group(
        title='Optional arguments')
    general_group.add_argument(
        '-h', '--help', action='help',
        help="Show this help message and exit")
    general_group.add_argument(
        '-v', '--verbose', action='count', dest='verbosity',
        help="More verbose messages")
    general_group.add_argument(
        '-V', '--version', action=CapturableVersionAction,
        version='%(prog)s ' + __version__,
        help="Show program's version number and exit",
        stdout=stdout)

    config_group = parser.add_argument_group(
        title='Config file',
        description="Use a config file instead of command line arguments. "
                    "This is useful if you are using many flags or want "
                    "to set different options per each module.")
    config_group.add_argument(
        '--config-file',
        help="Configuration file, must have a [mypy] section "
             "(defaults to {})".format(', '.join(defaults.CONFIG_FILES)))
    add_invertible_flag('--warn-unused-configs', default=False, strict_flag=True,
                        help="Warn about unused '[mypy-<pattern>]' config sections",
                        group=config_group)

    imports_group = parser.add_argument_group(
        title='Import discovery',
        description="Configure how imports are discovered and followed.")
    add_invertible_flag(
        '--namespace-packages', default=False,
        help="Support namespace packages (PEP 420, __init__.py-less)",
        group=imports_group)
    imports_group.add_argument(
        '--ignore-missing-imports', action='store_true',
        help="Silently ignore imports of missing modules")
    imports_group.add_argument(
        '--follow-imports', choices=['normal', 'silent', 'skip', 'error'],
        default='normal', help="How to treat imports (default normal)")
    imports_group.add_argument(
        '--python-executable', action='store', metavar='EXECUTABLE',
        help="Python executable used for finding PEP 561 compliant installed"
             " packages and stubs",
        dest='special-opts:python_executable')
    imports_group.add_argument(
        '--no-site-packages', action='store_true',
        dest='special-opts:no_executable',
        help="Do not search for installed PEP 561 compliant packages")
    imports_group.add_argument(
        '--no-silence-site-packages', action='store_true',
        help="Do not silence errors in PEP 561 compliant installed packages")

    platform_group = parser.add_argument_group(
        title='Platform configuration',
        description="Type check code assuming it will be run under certain "
                    "runtime conditions. By default, mypy assumes your code "
                    "will be run using the same operating system and Python "
                    "version you are using to run mypy itself.")
    platform_group.add_argument(
        '--python-version', type=parse_version, metavar='x.y',
        help='Type check code assuming it will be running on Python x.y',
        dest='special-opts:python_version')
    platform_group.add_argument(
        '-2', '--py2', dest='special-opts:python_version', action='store_const',
        const=defaults.PYTHON2_VERSION,
        help="Use Python 2 mode (same as --python-version 2.7)")
    platform_group.add_argument(
        '--platform', action='store', metavar='PLATFORM',
        help="Type check special-cased code for the given OS platform "
             "(defaults to sys.platform)")
    platform_group.add_argument(
        '--always-true', metavar='NAME', action='append', default=[],
        help="Additional variable to be considered True (may be repeated)")
    platform_group.add_argument(
        '--always-false', metavar='NAME', action='append', default=[],
        help="Additional variable to be considered False (may be repeated)")

    disallow_any_group = parser.add_argument_group(
        title='Disallow dynamic typing',
        description="Disallow the use of the dynamic 'Any' type under certain conditions.")
    disallow_any_group.add_argument(
        '--disallow-any-unimported', default=False, action='store_true',
        help="Disallow Any types resulting from unfollowed imports")
    disallow_any_group.add_argument(
        '--disallow-any-expr', default=False, action='store_true',
        help='Disallow all expressions that have type Any')
    disallow_any_group.add_argument(
        '--disallow-any-decorated', default=False, action='store_true',
        help='Disallow functions that have Any in their signature '
             'after decorator transformation')
    disallow_any_group.add_argument(
        '--disallow-any-explicit', default=False, action='store_true',
        help='Disallow explicit Any in type positions')
    add_invertible_flag('--disallow-any-generics', default=False, strict_flag=True,
                        help='Disallow usage of generic types that do not specify explicit type '
                        'parameters', group=disallow_any_group)
    add_invertible_flag('--disallow-subclassing-any', default=False, strict_flag=True,
                        help="Disallow subclassing values of type 'Any' when defining classes",
                        group=disallow_any_group)

    untyped_group = parser.add_argument_group(
        title='Untyped definitions and calls',
        description="Configure how untyped definitions and calls are handled. "
                    "Note: by default, mypy ignores any untyped function definitions "
                    "and assumes any calls to such functions have a return "
                    "type of 'Any'.")
    add_invertible_flag('--disallow-untyped-calls', default=False, strict_flag=True,
                        help="Disallow calling functions without type annotations"
                        " from functions with type annotations",
                        group=untyped_group)
    add_invertible_flag('--disallow-untyped-defs', default=False, strict_flag=True,
                        help="Disallow defining functions without type annotations"
                        " or with incomplete type annotations",
                        group=untyped_group)
    add_invertible_flag('--disallow-incomplete-defs', default=False, strict_flag=True,
                        help="Disallow defining functions with incomplete type annotations",
                        group=untyped_group)
    add_invertible_flag('--check-untyped-defs', default=False, strict_flag=True,
                        help="Type check the interior of functions without type annotations",
                        group=untyped_group)
    add_invertible_flag('--disallow-untyped-decorators', default=False, strict_flag=True,
                        help="Disallow decorating typed functions with untyped decorators",
                        group=untyped_group)

    none_group = parser.add_argument_group(
        title='None and Optional handling',
        description="Adjust how values of type 'None' are handled. For more context on "
                    "how mypy handles values of type 'None', see: "
                    "http://mypy.readthedocs.io/en/latest/kinds_of_types.html#no-strict-optional")
    add_invertible_flag('--no-implicit-optional', default=False, strict_flag=True,
                        help="Don't assume arguments with default values of None are Optional",
                        group=none_group)
    none_group.add_argument(
        '--strict-optional', action='store_true',
        help=argparse.SUPPRESS)
    none_group.add_argument(
        '--no-strict-optional', action='store_false', dest='strict_optional',
        help="Disable strict Optional checks (inverse: --strict-optional)")
    none_group.add_argument(
        '--strict-optional-whitelist', metavar='GLOB', nargs='*',
        help=argparse.SUPPRESS)

    lint_group = parser.add_argument_group(
        title='Configuring warnings',
        description="Detect code that is sound but redundant or problematic.")
    add_invertible_flag('--warn-redundant-casts', default=False, strict_flag=True,
                        help="Warn about casting an expression to its inferred type",
                        group=lint_group)
    add_invertible_flag('--warn-unused-ignores', default=False, strict_flag=True,
                        help="Warn about unneeded '# type: ignore' comments",
                        group=lint_group)
    add_invertible_flag('--no-warn-no-return', dest='warn_no_return', default=True,
                        help="Do not warn about functions that end without returning",
                        group=lint_group)
    add_invertible_flag('--warn-return-any', default=False, strict_flag=True,
                        help="Warn about returning values of type Any"
                             " from non-Any typed functions",
                        group=lint_group)
    add_invertible_flag('--warn-unreachable', default=False, strict_flag=False,
                        help="Warn about statements or expressions inferred to be"
                             " unreachable or redundant",
                        group=lint_group)

    # Note: this group is intentionally added here even though we don't add
    # --strict to this group near the end.
    #
    # That way, this group will appear after the various strictness groups
    # but before the remaining flags.
    # We add `--strict` near the end so we don't accidentally miss any strictness
    # flags that are added after this group.
    strictness_group = parser.add_argument_group(
        title='Miscellaneous strictness flags')

    add_invertible_flag('--allow-untyped-globals', default=False, strict_flag=False,
                        help="Suppress toplevel errors caused by missing annotations",
                        group=strictness_group)

    add_invertible_flag('--allow-redefinition', default=False, strict_flag=False,
                        help="Allow unconditional variable redefinition with a new type",
                        group=strictness_group)

    add_invertible_flag('--no-implicit-reexport', default=True, strict_flag=True,
                        dest='implicit_reexport',
                        help="Treat imports as private unless aliased",
                        group=strictness_group)

    add_invertible_flag('--strict-equality', default=False, strict_flag=True,
                        help="Prohibit equality, identity, and container checks for"
                             " non-overlapping types",
                        group=strictness_group)

    strict_help = "Strict mode; enables the following flags: {}".format(
        ", ".join(strict_flag_names))
    strictness_group.add_argument(
        '--strict', action='store_true', dest='special-opts:strict',
        help=strict_help)

    error_group = parser.add_argument_group(
        title='Configuring error messages',
        description="Adjust the amount of detail shown in error messages.")
    add_invertible_flag('--show-error-context', default=False,
                        dest='show_error_context',
                        help='Precede errors with "note:" messages explaining context',
                        group=error_group)
    add_invertible_flag('--show-column-numbers', default=False,
                        help="Show column numbers in error messages",
                        group=error_group)
    add_invertible_flag('--show-error-codes', default=False,
                        help="Show error codes in error messages",
                        group=error_group)
    add_invertible_flag('--pretty', default=False,
                        help="Use visually nicer output in error messages:"
                             " Use soft word wrap, show source code snippets,"
                             " and show error location markers",
                        group=error_group)
    add_invertible_flag('--no-color-output', dest='color_output', default=True,
                        help="Do not colorize error messages",
                        group=error_group)
    add_invertible_flag('--no-error-summary', dest='error_summary', default=True,
                        help="Do not show error stats summary",
                        group=error_group)
    add_invertible_flag('--show-absolute-path', default=False,
                        help="Show absolute paths to files",
                        group=error_group)

    incremental_group = parser.add_argument_group(
        title='Incremental mode',
        description="Adjust how mypy incrementally type checks and caches modules. "
                    "Mypy caches type information about modules into a cache to "
                    "let you speed up future invocations of mypy. Also see "
                    "mypy's daemon mode: "
                    "mypy.readthedocs.io/en/latest/mypy_daemon.html#mypy-daemon")
    incremental_group.add_argument(
        '-i', '--incremental', action='store_true',
        help=argparse.SUPPRESS)
    incremental_group.add_argument(
        '--no-incremental', action='store_false', dest='incremental',
        help="Disable module cache (inverse: --incremental)")
    incremental_group.add_argument(
        '--cache-dir', action='store', metavar='DIR',
        help="Store module cache info in the given folder in incremental mode "
             "(defaults to '{}')".format(defaults.CACHE_DIR))
    add_invertible_flag('--sqlite-cache', default=False,
                        help="Use a sqlite database to store the cache",
                        group=incremental_group)
    incremental_group.add_argument(
        '--cache-fine-grained', action='store_true',
        help="Include fine-grained dependency information in the cache for the mypy daemon")
    incremental_group.add_argument(
        '--skip-version-check', action='store_true',
        help="Allow using cache written by older mypy version")
    incremental_group.add_argument(
        '--skip-cache-mtime-checks', action='store_true',
        help="Skip cache internal consistency checks based on mtime")

    internals_group = parser.add_argument_group(
        title='Advanced options',
        description="Debug and customize mypy internals.")
    internals_group.add_argument(
        '--pdb', action='store_true', help="Invoke pdb on fatal error")
    internals_group.add_argument(
        '--show-traceback', '--tb', action='store_true',
        help="Show traceback on fatal error")
    internals_group.add_argument(
        '--raise-exceptions', action='store_true', help="Raise exception on fatal error"
    )
    internals_group.add_argument(
        '--custom-typing-module', metavar='MODULE', dest='custom_typing_module',
        help="Use a custom typing module")
    internals_group.add_argument(
        '--custom-typeshed-dir', metavar='DIR',
        help="Use the custom typeshed in DIR")
    add_invertible_flag('--warn-incomplete-stub', default=False,
                        help="Warn if missing type annotation in typeshed, only relevant with"
                             " --disallow-untyped-defs or --disallow-incomplete-defs enabled",
                        group=internals_group)
    internals_group.add_argument(
        '--shadow-file', nargs=2, metavar=('SOURCE_FILE', 'SHADOW_FILE'),
        dest='shadow_file', action='append',
        help="When encountering SOURCE_FILE, read and type check "
             "the contents of SHADOW_FILE instead.")
    add_invertible_flag('--fast-exit', default=False, help=argparse.SUPPRESS,
                        group=internals_group)

    report_group = parser.add_argument_group(
        title='Report generation',
        description='Generate a report in the specified format.')
    for report_type in sorted(defaults.REPORTER_NAMES):
        if report_type not in {'memory-xml'}:
            report_group.add_argument('--%s-report' % report_type.replace('_', '-'),
                                      metavar='DIR',
                                      dest='special-opts:%s_report' % report_type)

    other_group = parser.add_argument_group(
        title='Miscellaneous')
    other_group.add_argument(
        '--quickstart-file', help=argparse.SUPPRESS)
    other_group.add_argument(
        '--junit-xml', help="Write junit.xml to the given file")
    other_group.add_argument(
        '--find-occurrences', metavar='CLASS.MEMBER',
        dest='special-opts:find_occurrences',
        help="Print out all usages of a class member (experimental)")
    other_group.add_argument(
        '--scripts-are-modules', action='store_true',
        help="Script x becomes module x instead of __main__")

    if server_options:
        # TODO: This flag is superfluous; remove after a short transition (2018-03-16)
        other_group.add_argument(
            '--experimental', action='store_true', dest='fine_grained_incremental',
            help="Enable fine-grained incremental mode")
        other_group.add_argument(
            '--use-fine-grained-cache', action='store_true',
            help="Use the cache in fine-grained incremental mode")

    # hidden options
    parser.add_argument(
        '--stats', action='store_true', dest='dump_type_stats', help=argparse.SUPPRESS)
    parser.add_argument(
        '--inferstats', action='store_true', dest='dump_inference_stats',
        help=argparse.SUPPRESS)
    parser.add_argument(
        '--dump-build-stats', action='store_true',
        help=argparse.SUPPRESS)
    # --debug-cache will disable any cache-related compressions/optimizations,
    # which will make the cache writing process output pretty-printed JSON (which
    # is easier to debug).
    parser.add_argument('--debug-cache', action='store_true', help=argparse.SUPPRESS)
    # --dump-deps will dump all fine-grained dependencies to stdout
    parser.add_argument('--dump-deps', action='store_true', help=argparse.SUPPRESS)
    # --dump-graph will dump the contents of the graph of SCCs and exit.
    parser.add_argument('--dump-graph', action='store_true', help=argparse.SUPPRESS)
    # --semantic-analysis-only does exactly that.
    parser.add_argument('--semantic-analysis-only', action='store_true', help=argparse.SUPPRESS)
    # --local-partial-types disallows partial types spanning module top level and a function
    # (implicitly defined in fine-grained incremental mode)
    parser.add_argument('--local-partial-types', action='store_true', help=argparse.SUPPRESS)
    # --logical-deps adds some more dependencies that are not semantically needed, but
    # may be helpful to determine relative importance of classes and functions for overall
    # type precision in a code base. It also _removes_ some deps, so this flag should be never
    # used except for generating code stats. This also automatically enables --cache-fine-grained.
    # NOTE: This is an experimental option that may be modified or removed at any time.
    parser.add_argument('--logical-deps', action='store_true', help=argparse.SUPPRESS)
    # --bazel changes some behaviors for use with Bazel (https://bazel.build).
    parser.add_argument('--bazel', action='store_true', help=argparse.SUPPRESS)
    # --package-root adds a directory below which directories are considered
    # packages even without __init__.py.  May be repeated.
    parser.add_argument('--package-root', metavar='ROOT', action='append', default=[],
                        help=argparse.SUPPRESS)
    # --cache-map FILE ... gives a mapping from source files to cache files.
    # Each triple of arguments is a source file, a cache meta file, and a cache data file.
    # Modules not mentioned in the file will go through cache_dir.
    # Must be followed by another flag or by '--' (and then only file args may follow).
    parser.add_argument('--cache-map', nargs='+', dest='special-opts:cache_map',
                        help=argparse.SUPPRESS)

    # options specifying code to check
    code_group = parser.add_argument_group(
        title="Running code",
        description="Specify the code you want to type check. For more details, see "
                    "mypy.readthedocs.io/en/latest/running_mypy.html#running-mypy")
    code_group.add_argument(
        '-m', '--module', action='append', metavar='MODULE',
        default=[],
        dest='special-opts:modules',
        help="Type-check module; can repeat for more modules")
    code_group.add_argument(
        '-p', '--package', action='append', metavar='PACKAGE',
        default=[],
        dest='special-opts:packages',
        help="Type-check package recursively; can be repeated")
    code_group.add_argument(
        '-c', '--command', action='append', metavar='PROGRAM_TEXT',
        dest='special-opts:command',
        help="Type-check program passed in as string")
    code_group.add_argument(
        metavar='files', nargs='*', dest='special-opts:files',
        help="Type-check given files or directories")

    # Parse arguments once into a dummy namespace so we can get the
    # filename for the config file and know if the user requested all strict options.
    dummy = argparse.Namespace()
    parser.parse_args(args, dummy)
    config_file = dummy.config_file
    # Don't explicitly test if "config_file is not None" for this check.
    # This lets `--config-file=` (an empty string) be used to disable all config files.
    if config_file and not os.path.exists(config_file):
        parser.error("Cannot find config file '%s'" % config_file)

    options = Options()

    def set_strict_flags() -> None:
        for dest, value in strict_flag_assignments:
            setattr(options, dest, value)

    # Parse config file first, so command line can override.
    parse_config_file(options, set_strict_flags, config_file, stdout, stderr)

    # Set strict flags before parsing (if strict mode enabled), so other command
    # line options can override.
    if getattr(dummy, 'special-opts:strict'):  # noqa
        set_strict_flags()

    # Override cache_dir if provided in the environment
    environ_cache_dir = os.getenv('MYPY_CACHE_DIR', '')
    if environ_cache_dir.strip():
        options.cache_dir = environ_cache_dir

    # Parse command line for real, using a split namespace.
    special_opts = argparse.Namespace()
    parser.parse_args(args, SplitNamespace(options, special_opts, 'special-opts:'))

    # The python_version is either the default, which can be overridden via a config file,
    # or stored in special_opts and is passed via the command line.
    options.python_version = special_opts.python_version or options.python_version
    try:
        infer_python_executable(options, special_opts)
    except PythonExecutableInferenceError as e:
        parser.error(str(e))

    if special_opts.no_executable or options.no_site_packages:
        options.python_executable = None

    # Paths listed in the config file will be ignored if any paths are passed on
    # the command line.
    if options.files and not special_opts.files:
        special_opts.files = options.files

    # Check for invalid argument combinations.
    if require_targets:
        code_methods = sum(bool(c) for c in [special_opts.modules + special_opts.packages,
                                             special_opts.command,
                                             special_opts.files])
        if code_methods == 0:
            parser.error("Missing target module, package, files, or command.")
        elif code_methods > 1:
            parser.error("May only specify one of: module/package, files, or command.")

    # Check for overlapping `--always-true` and `--always-false` flags.
    overlap = set(options.always_true) & set(options.always_false)
    if overlap:
        parser.error("You can't make a variable always true and always false (%s)" %
                     ', '.join(sorted(overlap)))

    # Set build flags.
    if options.strict_optional_whitelist is not None:
        # TODO: Deprecate, then kill this flag
        options.strict_optional = True
    if special_opts.find_occurrences:
        state.find_occurrences = special_opts.find_occurrences.split('.')
        assert state.find_occurrences is not None
        if len(state.find_occurrences) < 2:
            parser.error("Can only find occurrences of class members.")
        if len(state.find_occurrences) != 2:
            parser.error("Can only find occurrences of non-nested class members.")

    # Set reports.
    for flag, val in vars(special_opts).items():
        if flag.endswith('_report') and val is not None:
            report_type = flag[:-7].replace('_', '-')
            report_dir = val
            options.report_dirs[report_type] = report_dir

    # Process --package-root.
    if options.package_root:
        process_package_roots(fscache, parser, options)

    # Process --cache-map.
    if special_opts.cache_map:
        if options.sqlite_cache:
            parser.error("--cache-map is incompatible with --sqlite-cache")

        process_cache_map(parser, special_opts, options)

    # Let logical_deps imply cache_fine_grained (otherwise the former is useless).
    if options.logical_deps:
        options.cache_fine_grained = True

    # Set target.
    if special_opts.modules + special_opts.packages:
        options.build_type = BuildType.MODULE
        search_paths = SearchPaths((os.getcwd(),), tuple(mypy_path() + options.mypy_path), (), ())
        targets = []
        # TODO: use the same cache that the BuildManager will
        cache = FindModuleCache(search_paths, fscache, options, special_opts.packages)
        for p in special_opts.packages:
            if os.sep in p or os.altsep and os.altsep in p:
                fail("Package name '{}' cannot have a slash in it.".format(p),
                     stderr)
            p_targets = cache.find_modules_recursive(p)
            if not p_targets:
                fail("Can't find package '{}'".format(p), stderr)
            targets.extend(p_targets)
        for m in special_opts.modules:
            targets.append(BuildSource(None, m, None))
        return targets, options
    elif special_opts.command:
        options.build_type = BuildType.PROGRAM_TEXT
        targets = [BuildSource(None, None, '\n'.join(special_opts.command))]
        return targets, options
    else:
        try:
            targets = create_source_list(special_opts.files, options, fscache)
        # Variable named e2 instead of e to work around mypyc bug #620
        # which causes issues when using the same variable to catch
        # exceptions of different types.
        except InvalidSourceList as e2:
            fail(str(e2), stderr)
        return targets, options


def process_package_roots(fscache: Optional[FileSystemCache],
                          parser: argparse.ArgumentParser,
                          options: Options) -> None:
    """Validate and normalize package_root."""
    if fscache is None:
        parser.error("--package-root does not work here (no fscache)")
    assert fscache is not None  # Since mypy doesn't know parser.error() raises.
    # Do some stuff with drive letters to make Windows happy (esp. tests).
    current_drive, _ = os.path.splitdrive(os.getcwd())
    dot = os.curdir
    dotslash = os.curdir + os.sep
    dotdotslash = os.pardir + os.sep
    trivial_paths = {dot, dotslash}
    package_root = []
    for root in options.package_root:
        if os.path.isabs(root):
            parser.error("Package root cannot be absolute: %r" % root)
        drive, root = os.path.splitdrive(root)
        if drive and drive != current_drive:
            parser.error("Package root must be on current drive: %r" % (drive + root))
        # Empty package root is always okay.
        if root:
            root = os.path.relpath(root)  # Normalize the heck out of it.
            if root.startswith(dotdotslash):
                parser.error("Package root cannot be above current directory: %r" % root)
            if root in trivial_paths:
                root = ''
            elif not root.endswith(os.sep):
                root = root + os.sep
        package_root.append(root)
    options.package_root = package_root
    # Pass the package root on the the filesystem cache.
    fscache.set_package_root(package_root)


def process_cache_map(parser: argparse.ArgumentParser,
                      special_opts: argparse.Namespace,
                      options: Options) -> None:
    """Validate cache_map and copy into options.cache_map."""
    n = len(special_opts.cache_map)
    if n % 3 != 0:
        parser.error("--cache-map requires one or more triples (see source)")
    for i in range(0, n, 3):
        source, meta_file, data_file = special_opts.cache_map[i:i + 3]
        if source in options.cache_map:
            parser.error("Duplicate --cache-map source %s)" % source)
        if not source.endswith('.py') and not source.endswith('.pyi'):
            parser.error("Invalid --cache-map source %s (triple[0] must be *.py[i])" % source)
        if not meta_file.endswith('.meta.json'):
            parser.error("Invalid --cache-map meta_file %s (triple[1] must be *.meta.json)" %
                         meta_file)
        if not data_file.endswith('.data.json'):
            parser.error("Invalid --cache-map data_file %s (triple[2] must be *.data.json)" %
                         data_file)
        options.cache_map[source] = (meta_file, data_file)


def fail(msg: str, stderr: TextIO) -> None:
    stderr.write('%s\n' % msg)
    sys.exit(2)
